Vascular smooth muscle cell state trajectories mediate molecular mechanisms of coronary disease risk
Direct links to NCBI, no account and no request form: the whole study as GSE333685_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 64 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1472024 and SRA study SRP663442. Searching any of these in the dataset finder brings you back here.
Supports a case/control comparison: 3 samples read as cases, 24 as controls.
Read from the first 40 of 64 sample titles: 36 distinct titles with little repetition. Check it against the sample list below before relying on it.
- GSM9457959 Mouse_aorta_sections
- GSM9458943 H3K27 acetylation ChIPseq
- GSM9458944 TEAD1 ChIPseq
- GSM9458945 CEBPB ChIPseq
- GSM9458946 siTEAD1 treated hTERT 2105 - 1
- GSM9458947 siTEAD1 treated hTERT 2105 - 2
- GSM9458948 siTEAD1 treated hTERT 2105 - 3
- GSM9458949 siNegative Control treated hTERT 2105 - 1
- GSM9458950 siNegative Control treated hTERT 2105 - 2
- GSM9458951 siNegative Control treated hTERT 2105 - 3
- GSM9550071 Control 0wk 1 mixed RNA
- GSM9550072 Control 0wk 2 mixed RNA
- GSM9550073 Control 3wk 1 mixed RNA
- GSM9550074 Control 3wk 2 mixed RNA
- GSM9550075 Control 5wk 1 mixed RNA
- GSM9550076 Control 5wk 2 mixed RNA
- GSM9550077 Control 5wk 3 tdt RNA
- GSM9550078 Control 5wk 3 nontdt RNA
- GSM9550079 Control 7wk 1 mixed RNA
- GSM9550080 Control 7wk 2 mixed RNA
- GSM9550081 Control 9wk 1 mixed RNA
- GSM9550082 Control 9wk 2 mixed RNA
- GSM9550083 Control 12wk 1 tdt RNA
- GSM9550084 Control 12wk 1 non-tdt RNA
- GSM9550085 Control 16wk 1 tdt RNA
- GSM9550086 Control 16wk 2 tdt RNA
- GSM9550087 Control 16wk 3 tdt RNA
- GSM9550088 Control 16wk 4 tdt RNA
- GSM9550089 Control 16wk 5 tdt RNA
- GSM9550090 Control 16wk 1 nontdt RNA
- GSM9550091 Control 16wk 2 nontdt RNA
- GSM9550092 Control 16wk 3 nontdt RNA
- GSM9550094 Control 16wk 4 nontdt RNA
- GSM9550095 Control 16wk 5 nontdt RNA
- GSM9550096 Tcf21KO 5wk 1 tdt RNA
- GSM9550097 Tcf21KO 5wk 1 nontdt RNA
- GSM9550098 Tcf21KO 12wk 1 tdt RNA
- GSM9550099 Tcf21KO 12wk 1 nontdt RNA
- GSM9550100 Tcf21KO 16wk 1 tdt RNA
- GSM9550101 Tcf21KO 16wk 2 tdt RNA
+ 24 more — browse all 64 samples with per-sample file links →
- GSE292586 SUMOylation orchestrates a metastable heterochromatin state on a MORC3-responsive element to silence IFNB1 at a distance 151 samples
- GSE274037 A microglia clonal inflammatory disorder in Alzheimer’s Disease 54 samples
- GSE288077 Metabolic dysfunction-associated steatotic liver disease may increase intrahepatic interferon gene signatures in patients with chronic hepatitis B 35 samples
- GSE325427 Integrative single-nucleus multiomic, CUT&Tag, and bulk RNA-seq profiling of human and mouse prefrontal cortex reveals gene regulatory mechanisms of cortical development and Meis2 function 34 samples
- GSE252238 A myeloid trisomy 21-associated gene variant is protective from Alzheimer’s disease 23 samples
- GSE301111 Dissecting cellular state alterations critical for the synergistic response and therapy resistance of the combined Abemaciclib, Temozolomide, and Radiation in DIPG PDOX models 14 samples
- GSE218866 ZBTB24 is a conserved multifaceted transcription factor at genes and centromeres that governs the DNA methylation state and expression of satellite repeats [RNA-Seq] 12 samples
- GSE274495 The remodeling of bivalent chromatin is essential for mouse peri-implantation embryogenesis. 421 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.