High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes
Direct links to NCBI, no account and no request form: the whole study as GSE320042_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 38 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1426040. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 31 samples.
8 replicated groups read from 38 sample titles; they account for 31 of them. Check it against the sample list below before relying on it.
- GSM9532629 CRC; Intact tissue; WU1735
- GSM9532630 CRC; Dissociated tissue; WU1735
- GSM9532631 CRC; Intact tissue; WU2160
- GSM9532632 CRC; Dissociated tissue; WU2160
- GSM9532633 CRC; Intact tissue; WU2161
- GSM9532634 CRC; Dissociated tissue; WU2161
- GSM9532635 CRC; Intact tissue; WU1519
- GSM9532636 CRC; Dissociated tissue; WU1519
- GSM9532639 Melanoma; Intact tissue; WU2109
- GSM9532640 Melanoma; Dissociated tissue; WU2109
- GSM9532641 Melanoma; Intact tissue; WU2130
- GSM9532642 Melanoma; Dissociated tissue; WU2130
- GSM9532643 Melanoma; Intact tissue; WU2321
- GSM9532644 Melanoma; Dissociated tissue; WU2321
- GSM9532647 CRC, WU1519
- GSM9532648 CRC, WU1735
- GSM9532649 CRC, WU2160
- GSM9532650 CRC, WU2161
- GSM9532651 Melanoma, WU2109
- GSM9532652 Melanoma, WU2130
- GSM9532654 Melanoma, WU2321
- GSM9532655 Melanoma, WU1340
- GSM9532656 Melanoma, WU1373
- GSM9532657 Melanoma, WU1384, rep 1
- GSM9532658 Melanoma, WU1384, rep 2
- GSM9532659 Melanoma, WU1457, Visium HD, 16um
- GSM9532660 Melanoma, WU1609
- GSM9532661 Melanoma, WU2109, Visium HD, 16um
- GSM9532662 Melanoma, WU2130, rep 1
- GSM9532663 Melanoma, WU2130, rep 2
- GSM9532664 Melanoma, WU2415
- GSM9532665 Melanoma, WU3049
- GSM9532666 Melanoma, WU3244
- GSM9532667 Melanoma, YUADD
- GSM9532668 Melanoma, YUALT
- GSM9532669 Melanoma, YUBOISE
- GSM9532670 Melanoma, YUMAZO
- GSM9532671 Melanoma, YUSTE
- GSE309593 Longitudinal Analysis of Multiple Myeloma: Therapeutic Response and Immune Microenvironment Dynamics in the Context of Tumor Heterogeneity [CITE-Seq] 91 samples
- GSE308745 The Cd4+ T cell population Partners with Tpex CD8 T cells to mediate Antitumor Immunity in the Tumor Microenvironment.[PB cohort2] 87 samples
- GSE291804 Multi-omics analysis of brain metastasis elucidates obesity induced prostaglandin crosstalk in tumor microenvironment restrain CD8T cell expansion 18 samples
- GSE317520 Mitochondrial DNA Mutations Drive Tumor Heterogeneity in Papillary Thyroid Carcinoma 92 samples
- GSE333851 Spatial Glyco-Codes Define Human Liver Pathology and Progression 32 samples
- GSE228360 Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation 24 samples
- GSE310797 Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage 19 samples
- GSE189184 Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics 16 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.