H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation
Direct links to NCBI, no account and no request form: the whole study as GSE296994_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 174 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1262331 and SRA study SRP584851. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 40 samples.
20 replicated groups read from the first 40 of 174 sample titles; they account for 40 of them. Check it against the sample list below before relying on it.
- GSM8981253 E2C_Input_rep1
- GSM8981254 E2C_Input_rep2
- GSM8981255 E2C_H3K9me2_rep1
- GSM8981256 E2C_H3K9me2_rep2
- GSM8981257 Morula_Input_rep1
- GSM8981258 Morula_Input_rep2
- GSM8981259 Morula_H3K9me2_rep1
- GSM8981260 Morula_H3K9me2_rep2
- GSM8981261 RNA_E2C_control_rep1
- GSM8981262 RNA_E2C_control_rep2
- GSM8981263 RNA_E2C_Kdm3ab-mDKO_rep1
- GSM8981264 RNA_E2C_Kdm3ab-mDKO_rep2
- GSM8981265 RNA_MII_control_rep1
- GSM8981266 RNA_MII_control_rep2
- GSM8981267 RNA_MII_Kdm3ab-mDKO_rep1
- GSM8981268 RNA_MII_Kdm3ab-mDKO_rep2
- GSM8981269 RNA_mESC_33-6_NT_control_rep1
- GSM8981270 RNA_mESC_33-6_NT_control_rep2
- GSM8981271 RNA_mESC_33-6_OHT_Setdb1-KO_rep1
- GSM8981272 RNA_mESC_33-6_OHT_Setdb1-KO_rep2
- GSM8981273 RNA_mESC_SE_NT_Suv39h1/2-DKO_rep1
- GSM8981274 RNA_mESC_SE_NT_Suv39h1/2-DKO_rep2
- GSM8981275 RNA_mESC_SE_OHT_Suv39h1/2;Setdb1-TKO_rep1
- GSM8981276 RNA_mESC_SE_OHT_Suv39h1/2;Setdb1-TKO_rep2
- GSM8981277 RNA_mESC_SG_NT_G9a-KO_rep1
- GSM8981278 RNA_mESC_SG_NT_G9a-KO_rep2
- GSM8981279 RNA_mESC_SG_OHT_G9a;Setdb1-DKO_rep1
- GSM8981280 RNA_mESC_SG_OHT_G9a;Setdb1-DKO_rep2
- GSM8981281 RNA_mESC_3S1G_NT_G9a;Suv39h1/2-TKO_rep1
- GSM8981282 RNA_mESC_3S1G_NT_G9a;Suv39h1/2-TKO_rep2
- GSM8981283 RNA_mESC_3S1G_OHT_G9a;Suv39h1/2;Setdb1-QKO_rep1
- GSM8981284 RNA_mESC_3S1G_OHT_G9a;Suv39h1/2;Setdb1-QKO_rep2
- GSM8981285 RNA_mESC_3S1Gx_OHT_Dux-KO:G9a;Suv39h1/2;Setdb1-QKO_rep1
- GSM8981286 RNA_mESC_3S1Gx_OHT_Dux-KO:G9a;Suv39h1/2;Setdb1-QKO_rep2
- GSM8981287 RNA_mESC_33i_NT_Tet-on-Dux:control_dox0_rep1
- GSM8981288 RNA_mESC_33i_NT_Tet-on-Dux:control_dox0_rep2
- GSM8981289 RNA_mESC_33i_NT_Tet-on-Dux:control_dox0.2_rep1
- GSM8981290 RNA_mESC_33i_NT_Tet-on-Dux:control_dox0.2_rep2
- GSM8981291 RNA_mESC_33i_OHT_Tet-on-Dux:Setdb1-KO_dox0_rep1
- GSM8981292 RNA_mESC_33i_OHT_Tet-on-Dux:Setdb1-KO_dox0_rep2
+ 134 more — browse all 174 samples with per-sample file links →
- GSE292289 H3K79 methylation and H3K36 trimethylation synergistically regulate gene expression in pluripotent stem cells 94 samples
- GSE248586 A conserved epithelial wound-like transcriptional program driven by FOSL1 underlies malignant progression of pancreatic ductal adenocarcinoma 57 samples
- GSE341379 Distinct histone 3 lysine methylation states underlie tumor immune surveillance 50 samples
- GSE305975 Basal level of ATF4 promotes T cell readiness for activation-induced proliferation 29 samples
- GSE217664 Decoding Trp53 regulatory program in various tissues and organs 404 samples
- GSE312302 NMuMG PBRM1 RNA-seq, ATAC-seq, and ChIP-seq 171 samples
- GSE291274 The placentalia specific histone H3.4 promotes germ cell development and reproductive fitness 167 samples
- GSE318069 eIF4G2-mediated Translation Initiation of Histone Modifiers is Essential for Intestinal Stem Cell Maintenance and Differentiation 145 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.