NMuMG PBRM1 RNA-seq, ATAC-seq, and ChIP-seq
Direct links to NCBI, no account and no request form: the whole study as GSE312302_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 171 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1372805 and SRA study SRP589398. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 39 samples.
13 replicated groups read from the first 40 of 171 sample titles; they account for 39 of them. Check it against the sample list below before relying on it.
- GSM8315416 Control_0h_biol rep1
- GSM8315417 Control_0h_biol rep2
- GSM8315418 Control_0h_biol rep3
- GSM8315419 Control_24h_biol rep1
- GSM8315420 Control_24h_biol rep2
- GSM8315421 Control_24h_biol rep3
- GSM8315422 Control_48h_biol rep1
- GSM8315423 Control_48h_biol rep2
- GSM8315424 Control_48h_biol rep3
- GSM8315425 Control_72h_biol rep1
- GSM8315426 Control_72h_biol rep2
- GSM8315427 Control_72h_biol rep3
- GSM8315428 PBRM1 KO_0h_biol rep1
- GSM8315429 PBRM1 KO_0h_biol rep2
- GSM8315430 PBRM1 KO_0h_biol rep3
- GSM8315431 PBRM1 KO_24h_biol rep1
- GSM8315432 PBRM1 KO_24h_biol rep2
- GSM8315433 PBRM1 KO_24h_biol rep3
- GSM8315434 PBRM1 KO_48h_biol rep1
- GSM8315435 PBRM1 KO_48h_biol rep2
- GSM8315436 PBRM1 KO_48h_biol rep3
- GSM8315437 PBRM1 KO_72h_biol rep1
- GSM8315438 PBRM1 KO_72h_biol rep2
- GSM8315439 PBRM1 KO_72h_biol rep3
- GSM8315440 pLKO_0h_biol rep1
- GSM8315441 pLKO_0h_biol rep2
- GSM8315442 pLKO_0h_biol rep3
- GSM8315443 pLKO_24h_biol rep1
- GSM8315444 pLKO_24h_biol rep2
- GSM8315445 pLKO_24h_biol rep3
- GSM8315446 pLKO_48h_biol rep1
- GSM8315447 pLKO_48h_biol rep2
- GSM8315448 pLKO_48h_biol rep3
- GSM8315449 pLKO_72h_biol rep1
- GSM8315450 pLKO_72h_biol rep2
- GSM8315451 pLKO_72h_biol rep3
- GSM8315452 shATF3_0h_biol rep1
- GSM8315453 shATF3_0h_biol rep2
- GSM8315454 shATF3_0h_biol rep3
- GSM8315455 shATF3_24h_biol rep1
+ 131 more — browse all 171 samples with per-sample file links →
- GSE292377 Step-wise signal integration governs adaptive programming of lymphocytes [bulkRNA-seq and ATAC-seq] 41 samples
- GSE327645 BACH1 acts as a pioneer repressor to enable macrophage plasticity and adaptation across tissues and inflammatory contexts [RNA-seq/ATAC-seq] 28 samples
- GSE266317 RNA-seq and ChIP-seq analysis of H3K27ac, H3K27me3, H3K9me2, and JMJD1A in 3T3-L1 cells and ChIP-seq analysis of NFIC in imSVF cells. 14 samples
- GSE190309 Single nuclei RNA and ATAC sequencing of mouse trigeminal ganglia at baseline and in atopic dermatitis-like disease. 14 samples
- GSE217664 Decoding Trp53 regulatory program in various tissues and organs 404 samples
- GSE296994 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation 174 samples
- GSE291274 The placentalia specific histone H3.4 promotes germ cell development and reproductive fitness 167 samples
- GSE318069 eIF4G2-mediated Translation Initiation of Histone Modifiers is Essential for Intestinal Stem Cell Maintenance and Differentiation 145 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.