Dosage-dependent role of Gata3 in primitive endoderm and trophectoderm specification in embryonic stem cells
Direct links to NCBI, no account and no request form: the whole study as GSE306026_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 22 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1308959 and SRA study SRP610366. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 20 samples.
10 replicated groups read from 22 sample titles; they account for 20 of them. Check it against the sample list below before relying on it.
- GSM9191735 Gata3High_noDox_rep1
- GSM9191736 Gata3High_Dox1d_rep1
- GSM9191737 Gata3High_Dox3d_rep1
- GSM9191738 Gata3High_Dox5d_rep1
- GSM9191739 Gata3High_noDox_rep2
- GSM9191740 Gata3High_Dox1d_rep2
- GSM9191741 Gata3High_Dox3d_rep2
- GSM9191742 Gata3High_Dox5d_rep2
- GSM9191743 Gata3Low_noDox_rep1
- GSM9191744 Gata3Low_Dox1d_rep1
- GSM9191745 Gata3Low_Dox3d_rep1
- GSM9191746 Gata3Low_Dox5d_rep1
- GSM9191747 Gata3Low_noDox_rep2
- GSM9191748 Gata3Low_Dox1d_rep2
- GSM9191749 Gata3Low_Dox3d_rep2
- GSM9191750 Gata3Low_Dox5d_rep2
- GSM9191751 ChIPseq_Input
- GSM9191752 ChIPseq_Gata3High_Dox2d_rep1
- GSM9191753 ChIPseq_Gata3High_Dox2d_rep2
- GSM9191754 ChIPseq_Gata3Low_Dox2d_rep1
- GSM9191755 ChIPseq_Gata3Low_Dox2d_rep2
- GSM9655655 scD3Blastoid
- GSE318069 eIF4G2-mediated Translation Initiation of Histone Modifiers is Essential for Intestinal Stem Cell Maintenance and Differentiation 145 samples
- GSE292289 H3K79 methylation and H3K36 trimethylation synergistically regulate gene expression in pluripotent stem cells 94 samples
- GSE288662 Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Multiomics] 20 samples
- GSE279796 Setdb1 regulates proper differentiation of adult intestinal stem cells via restraining permissive chromatin structure and transcriptional variability 18 samples
- GSE239480 The Role of TCF7L2 in Hepatic Metabolic Zonation 12 samples
- GSE217664 Decoding Trp53 regulatory program in various tissues and organs 404 samples
- GSE296994 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation 174 samples
- GSE312302 NMuMG PBRM1 RNA-seq, ATAC-seq, and ChIP-seq 171 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.