RAPIDASH: Tag-free enrichment of ribosome-associated proteins reveals compositional dynamics in embryonic tissues, cancer cells, and macrophages [RNA-Seq and Ribo-Seq]
Direct links to NCBI, no account and no request form: the whole study as GSE274188_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 12 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1145378 and SRA study SRP524765. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 12 samples.
4 replicated groups read from 12 sample titles; they account for 12 of them. Check it against the sample list below before relying on it.
- GSM8444806 H1 hiN D14, LLPHNterm/Nterm, Ribo-seq, rep1
- GSM8444807 H1 hiN D14, LLPHNterm/Nterm, Ribo-seq, rep2
- GSM8444808 H1 hiN D14, LLPHNterm/Nterm, Ribo-seq, rep3
- GSM8444809 H1 hiN D14, LLPHwt/wt, Ribo-seq, rep1
- GSM8444810 H1 hiN D14, LLPHwt/wt, Ribo-seq, rep2
- GSM8444811 H1 hiN D14, LLPHwt/wt, Ribo-seq, rep3
- GSM8444812 H1 hiN D14, LLPHNterm/Nterm, RNAseq, rep1
- GSM8444813 H1 hiN D14, LLPHNterm/Nterm, RNAseq, rep2
- GSM8444814 H1 hiN D14, LLPHNterm/Nterm, RNAseq, rep3
- GSM8444815 H1 hiN D14, LLPHwt/wt, RNAseq, rep1
- GSM8444816 H1 hiN D14, LLPHwt/wt, RNAseq, rep2
- GSM8444817 H1 hiN D14, LLPHwt/wt, RNAseq, rep3
- GSE310353 In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment 116 samples
- GSE307215 Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease 104 samples
- GSE263748 Genetic dependencies associated with transcription factor activities in human cancer cell lines 23 samples
- GSE290408 Comprehensive profiling of N6-methyladnosine (m6A) readouts reveals novel m6A readers that regulate human embryonic stem cell differentiation [GLORI-seq] 12 samples
- GSE327417 Atlas of human gut-associated lymphoid tissue reveals immunomodulatory interactions of B cells 12 samples
- GSE248132 LARP6 promotes carcinogenic features of triple negative breast cancer cell line by directly modulating alternative splicing of associated genes 10 samples
- GSE300844 Deciphering the functional impact of Alzheimer’s Disease-associated variants in resting and proinflammatory immune cells 192 samples
- GSE305263 Integrated RNA, translation, and proteome profiling reveals midbody remnants as selectively organized signaling vesicles 42 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.