GEO series
Reverse translational discovery reveals dysregulation of CD4+ and CD8+ resident memory T, myeloid, and stromal cells in steroid-refractory, checkpoint inhibitor colitis
GSE253723
Homo sapiens
Expression profiling by high throughput sequencing; Other
12 samples
Submitted 2024/03/20
Platform GPL24676
SuperSeries — this record groups several sub-series.
Summary
This SuperSeries is composed of the SubSeries listed below.
Published in
He JY, Kim YJ, Mennillo E et al.
· Journal for immunotherapy of cancer 2024
· PMID 38642938
· doi:10.1136/jitc-2023-008628
This dataset
Download
Direct links to NCBI, no account and no request form: the whole study as GSE253723_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 12 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1066821. Searching any of these in the dataset finder brings you back here.
Study design
8 × HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL vs 4 × HS1-BL HS2-BL HS3-BL HS4-BL HS6-BL HS7-BL HS8-BL HS9-BL HS10-BL HS11-BL HS12-BL HS13-BL HS14-BL HS15-BL
Supports a between-group comparison across 12 samples.
2 replicated groups read from 12 sample titles; they account for 12 of them. Check it against the sample list below before relying on it.
Samples in this study
0 selected
- GSM8026960 XAUT2-POOL-SCG7: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026961 XAUT2-POOL-SCG8: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026962 XAUT2-POOL-SCG1: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026963 XAUT2-POOL-SCG2: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026964 XAUT2-POOL-SCG3: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026965 XAUT2-POOL-SCG4: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026966 XAUT2-POOL-SCG5: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026967 XAUT2-POOL-SCG6: HS1-CL HS2-CL HS3-CL HS4-CL HS5-CL HS7-CL HS8-CL HS9-CL HS10-CL HS11-CL HS12-CL HS13-CL HS14-CL HS15-CL
- GSM8026968 XAUT2-POOL-SCG9:HS1-BL HS2-BL HS3-BL HS4-BL HS6-BL HS7-BL HS8-BL HS9-BL HS10-BL HS11-BL HS12-BL HS13-BL HS14-BL HS15-BL
- GSM8026969 XAUT2-POOL-SCG10:HS1-BL HS2-BL HS3-BL HS4-BL HS6-BL HS7-BL HS8-BL HS9-BL HS10-BL HS11-BL HS12-BL HS13-BL HS14-BL HS15-BL
- GSM8026970 XAUT2-POOL-SCG11:HS1-BL HS2-BL HS3-BL HS4-BL HS6-BL HS7-BL HS8-BL HS9-BL HS10-BL HS11-BL HS12-BL HS13-BL HS14-BL HS15-BL
- GSM8026971 XAUT2-POOL-SCG12:HS1-BL HS2-BL HS3-BL HS4-BL HS6-BL HS7-BL HS8-BL HS9-BL HS10-BL HS11-BL HS12-BL HS13-BL HS14-BL HS15-BL
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