RNA-seq for iPSC-derived macrophages with/without Lipopolysaccharide (LPS) stimulation.

Direct links to NCBI, no account and no request form: the whole study as GSE237489_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA995504 and SRA study SRP449835. Searching any of these in the dataset finder brings you back here.

Read from 8 sample titles: 8 distinct titles with little repetition. Check it against the sample list below before relying on it.

• GSM7622140 S1_WT
• GSM7622141 S2_WT_LPS
• GSM7622142 S3_Mut
• GSM7622143 S4_Mut_LPS
• GSM7622144 S5_WT
• GSM7622145 S6_WT_LPS
• GSM7622146 S7_Mut
• GSM7622147 S8_Mut_LPS

• GSE267718 Single cell RNA sequencing (scRNAseq) of urine-derived cells, peripheral blood mononuclear (PBMC), and tumor cells from bladder cancer patients. 33 samples
• GSE303346 Single-Cell RNA-Seq Reveals Immunosuppressive Effects of Triple-Negative Breast Cancer–Derived Exosomes on NK Cell Responses 16 samples
• GSE303509 Biomarker-guided responses in patient-derived organoids predict effective therapies in breast cancer 14 samples
• GSE342455 Transcriptomic profiling of tumor-associated macrophages following pharmacological SYK inhibition in a human breast cancer co-culture model 6 samples
• GSE314342 Genome-scale perturb-seq in primary human CD4+ T cells reveals genes regulating T cell programs and human immune traits. 577 samples
• GSE205672 Transcriptomes of human PBMCs and monocytes in sepsis patients 460 samples
• GSE319641 RNA-Seq profiling of pre- and on-treatment tumor samples from breast cancer patients enrolled in the NeoTRIP trial. 401 samples
• GSE309595 Longitudinal Analysis of Multiple Myeloma: Therapeutic Response and Immune Microenvironment Dynamics in the Context of Tumor Heterogeneity [scRNA-seq] 270 samples

Search all human RNA-seq datasets in GEO →