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Adipose tissue retains an epigenetic memory of obesity after weight loss

GSE236580 Mus musculus Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing 135 samples Submitted 2024/11/14 Platform GPL24247
SuperSeries — this record groups several sub-series.
Summary
This SuperSeries is composed of the SubSeries listed below.
Published in
Adipose tissue retains an epigenetic memory of obesity after weight loss
Hinte LC, Castellano-Castillo D, Ghosh A et al. · Nature 2024 · PMID 39558077 · doi:10.1038/s41586-024-08165-7
This dataset
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Direct links to NCBI, no account and no request form: the whole study as GSE236580_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 135 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA991586 and SRA study SRP447450. Searching any of these in the dataset finder brings you back here.

Study design
8 conditions, mostly in triplicate
C_short_ATAC ×3 H_short_ATAC ×3 CC_short_ATAC ×3 HC_short_ATAC ×3 HH_long_ATAC ×3 HHC_long_ATAC ×3 CC_long_ATAC ×2 CCC_long_ATAC ×2 +18 more

Supports a between-group comparison across 22 samples.

8 replicated groups read from the first 40 of 135 sample titles; they account for 22 of them. Check it against the sample list below before relying on it.

Samples in this study

+ 95 more — browse all 135 samples with per-sample file links →

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