Cell of origin epigenetic priming determines susceptibility to Tet2 oncogenic mutation
Direct links to NCBI, no account and no request form: the whole study as GSE247970_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 76 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1041319 and SRA study SRP427252. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 20 samples.
6 replicated groups read from the first 40 of 76 sample titles; they account for 20 of them. Check it against the sample list below before relying on it.
- GSM7096200 GMP_Control_Rep1
- GSM7096201 GMP_Tet2_Rep1
- GSM7096202 Lin_neg_CD11b_Control_Rep1
- GSM7096203 Lin_neg_CD11b_Tet2_Rep1
- GSM7096204 GMP_Control_Rep2
- GSM7096205 GMP_Tet2_Rep2
- GSM7096206 Lin_neg_CD11b_Control_Rep2
- GSM7096207 Lin_neg_CD11b_Tet2_Rep2
- GSM7903898 GMP_Tet2_Rep3
- GSM7903899 GMP_Tet2_Rep4
- GSM7903900 GMP_Tet2_Sox4OE_Rep1
- GSM7903901 GMP_Tet2_Sox4OE_Rep2
- GSM7903902 Lin_neg_CD11b_Tet2_Rep3
- GSM7903903 Lin_neg_CD11b_Tet2_Rep4
- GSM7903904 Lin_neg_CD11b_Tet2_Sox4OE_Rep1
- GSM7903905 Lin_neg_CD11b_Tet2_Sox4OE_Rep2
- GSM7903906 GMP_Control_Rep2
- GSM7903907 GMP_Tet2_Rep2
- GSM7903908 Lin_neg_CD11b_Control_Rep2
- GSM7903909 Lin_neg_CD11b_Tet2_Rep2
- GSM7903910 1_SCF_Control
- GSM7903911 1_SCF_Tet2
- GSM7903912 2_SCF_Control
- GSM7903913 2_SCF_Tet2
- GSM7903914 3_SCF_Control
- GSM7903915 3_SCF_Tet2
- GSM7903916 4_SCF_Control
- GSM7903917 4_SCF_Tet2
- GSM7903918 5_SCF_Control
- GSM7903919 5_SCF_Tet2
- GSM7903920 7_SCF_Control
- GSM7903921 7_SCF_Tet2
- GSM7903922 8_SCF_Control
- GSM7903923 8_SCF_Tet2
- GSM7903924 9_SCF_Control
- GSM7903925 9_SCF_Tet2
- GSM7903926 10_SCF_Control
- GSM7903927 10_SCF_Tet2
- GSM7903928 11_SCF_Control
- GSM7903929 11_SCF_Tet2
+ 36 more — browse all 76 samples with per-sample file links →
- GSE236580 Adipose tissue retains an epigenetic memory of obesity after weight loss 135 samples
- GSE274969 Genetic variation in the activity of a TREM2-p53 signaling axis determines oxygeninduced lung injury 77 samples
- GSE294258 Intracellular iron homeostasis-regulated epigenetic reprogramming contributes to -7/del(7q) leukemia 71 samples
- GSE272888 Dynamic transcriptional and epigenetic changes define postnatal tendon growth 54 samples
- GSE266584 Epigenetic and transcriptional regulation of dendritic cell development and anti-tumor function by HDAC1 34 samples
- GSE279810 Genetic and epigenetic regulation of Treg cell fitness by autism-related chromatin remodeler CHD8 18 samples
- GSE281007 Lysine Crotonylation Acts as an Epigenetic Switch for Glutamate Neurotransmission and Spatial Memory 12 samples
- GSE217664 Decoding Trp53 regulatory program in various tissues and organs 404 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.