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Epigenetic and transcriptional regulation of dendritic cell development and anti-tumor function by HDAC1

GSE266584 Mus musculus Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing 34 samples Submitted 2024/05/27 Platform GPL21493Platform GPL24247
SuperSeries — this record groups several sub-series.
Summary
This SuperSeries is composed of the SubSeries listed below.
Published in
The histone deacetylase HDAC1 controls dendritic cell development and anti-tumor immunity
De Sá Fernandes C, Novoszel P, Gastaldi T et al. · Cell reports 2024 · PMID 38829740 · doi:10.1016/j.celrep.2024.114308
This dataset
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Direct links to NCBI, no account and no request form: the whole study as GSE266584_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 34 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1107623 and SRA study SRP505588. Searching any of these in the dataset finder brings you back here.

Study design
10 conditions, mostly in duplicate
cDC1_WT ×3 cDC1_KO ×3 pDC KO ×3 ATAC_cDC1_WT ×2 ATAC_cDC2 WT ×2 ATAC_cDC1_KO ×2 ATAC_cDC2 KO ×2 cDC2 WT ×2 +13 more

Supports a between-group comparison across 23 samples.

10 replicated groups read from 34 sample titles; they account for 23 of them. Check it against the sample list below before relying on it.

Samples in this study
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