HIV-1 reprograms CD4 T cell responses by impairing antigen-specific communication with dendritic cells

Direct links to NCBI, no account and no request form: the whole study as GSE304995_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1303660 and SRA study SRP607663. Searching any of these in the dataset finder brings you back here.

Supports a between-group comparison across 8 samples.

1 replicated groups read from 8 sample titles; they account for 8 of them. Check it against the sample list below before relying on it.

• GSM9160751 OT-II.2 CD4 T cell-BMDC co-culture_sublib1
• GSM9160752 OT-II.2 CD4 T cell-BMDC co-culture_sublib2
• GSM9160753 OT-II.2 CD4 T cell-BMDC co-culture_sublib3
• GSM9160754 OT-II.2 CD4 T cell-BMDC co-culture_sublib4
• GSM9160755 OT-II.2 CD4 T cell-BMDC co-culture_sublib5
• GSM9160756 OT-II.2 CD4 T cell-BMDC co-culture_sublib6
• GSM9160757 OT-II.2 CD4 T cell-BMDC co-culture_sublib7
• GSM9160758 OT-II.2 CD4 T cell-BMDC co-culture_sublib8

• GSE325548 Time-resolved transcriptomic profiling of surgical wounds identifies stage-specific therapeutic targets for residual ovarian cancer 48 samples
• GSE285471 APOE genotype modifies the gene signature of microglial and astrocytic responses to aging 24 samples
• GSE334940 Tissue nanotransfection-mediated induction of neurogenic programs promotes myoprotective responses in denervated skeletal muscle 15 samples
• GSE334769 Immunogen-Sponge Hydrogel Reverses TIM-3–Mediated Dendritic-Cell Exhaustion in Alveolar Echinococcosis 12 samples
• GSE314817 Multi-tissue, multi-time-point transcriptomic atlas of aging in mice and rats [mouse] 2432 samples
• GSE293709 Transcriptome analysis in the prefrontal cortex of different ASD mouse models treated with drug 1565 samples
• GSE294832 Modular neuroinflammatory network discovery from large-scale phenotypic screening in genetically heterogeneous mice [part10] 1000 samples
• GSE326100 scRNA-seq of mouse cochlea organoid cells 768 samples

Search all mouse RNA-seq datasets in GEO →