Neurons undergo IFNγ-driven persistent epigenetic shifts and synaptic remodeling in the inflamed brain [ChIP-Seq]
Direct links to NCBI, no account and no request form: the whole study as GSE289108_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 57 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1221548 and SRA study SRP562712. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 40 samples.
20 replicated groups read from the first 40 of 57 sample titles; they account for 40 of them. Check it against the sample list below before relying on it.
- GSM8783817 WT_CC10_H3K27ac_HC_rep1
- GSM8783818 WT_CC10_H3K27ac_HC_rep2
- GSM8783819 WT_CC10_H3K27me3_HC_rep1
- GSM8783820 WT_CC10_H3K27me3_HC_rep2
- GSM8783821 WT_CC10_H3K4me3_HC_rep1
- GSM8783822 WT_CC10_H3K4me3_HC_rep2
- GSM8783823 WT_CC30_H3K27ac_HC_rep1
- GSM8783824 WT_CC30_H3K27ac_HC_rep2
- GSM8783825 WT_CC30_H3K27me3_HC_rep1
- GSM8783826 WT_CC30_H3K27me3_HC_rep2
- GSM8783827 WT_CC30_H3K4me3_HC_rep1
- GSM8783828 WT_CC30_H3K4me3_HC_rep2
- GSM8783829 WT_CC70_H3K27ac_HC_rep1
- GSM8783830 WT_CC70_H3K27ac_HC_rep2
- GSM8783831 WT_CC70_H3K27me3_HC_rep1
- GSM8783832 WT_CC70_H3K27me3_HC_rep2
- GSM8783833 WT_CC70_H3K4me3_HC_rep1
- GSM8783834 WT_CC70_H3K4me3_HC_rep2
- GSM8783835 WT_CnC10_H3K27ac_HC_rep1
- GSM8783836 WT_CnC10_H3K27ac_HC_rep2
- GSM8783837 WT_CnC10_H3K27me3_HC_rep1
- GSM8783838 WT_CnC10_H3K27me3_HC_rep2
- GSM8783839 WT_CnC10_H3K4me3_HC_rep1
- GSM8783840 WT_CnC10_H3K4me3_HC_rep2
- GSM8783841 WT_CC10_H3K27ac_BS_rep1
- GSM8783842 WT_CC10_H3K27ac_BS_rep2
- GSM8783843 WT_CC10_H3K27me3_BS_rep1
- GSM8783844 WT_CC10_H3K27me3_BS_rep2
- GSM8783845 WT_CC10_H3K4me3_BS_rep1
- GSM8783846 WT_CC10_H3K4me3_BS_rep2
- GSM8783847 WT_CC30_H3K27ac_BS_rep1
- GSM8783848 WT_CC30_H3K27ac_BS_rep2
- GSM8783849 WT_CC30_H3K27me3_BS_rep1
- GSM8783850 WT_CC30_H3K27me3_BS_rep2
- GSM8783851 WT_CC30_H3K4me3_BS_rep1
- GSM8783852 WT_CC30_H3K4me3_BS_rep2
- GSM8783853 WT_CnC10_H3K27ac_BS_rep1
- GSM8783854 WT_CnC10_H3K27ac_BS_rep2
- GSM8783855 WT_CnC10_H3K27me3_BS_rep1
- GSM8783856 WT_CnC10_H3K27me3_BS_rep2
+ 17 more — browse all 57 samples with per-sample file links →
- GSE339012 Mega-Enhancers Compartmentalize Transcriptionally Active Long Genes in the Brain [ChIP-Seq] 22 samples
- GSE275917 Nup153 regulates neuronal responsiveness through HDAC1-mediated epigenetic modulation [ChIP-seq] 17 samples
- GSE283906 RXR-Mediated Remodeling of Transcriptional and Chromatin Landscapes in APP Mouse Brain: Insights from Integrated Single-Cell RNA and ATAC Profiling 10 samples
- GSE332794 Epigenomic profiling of H3K27ac in mouse brain regions under morphine and LPS exposure 206 samples
- GSE261221 Scaffolding element rewires genome architecture during differentiation at the Zfp608 locus (ChIP-Seq) 189 samples
- GSE303384 Mechanism of maintenance and establishment of repression by the Mtg16 tumor suppressor [CUT&RUN, ChIP-Seq] 92 samples
- GSE272524 Chromatin-dependent motif syntax defines differentiation trajectories [ChIP-seq] 76 samples
- GSE294085 SIRT6 Overexpression Counteracts Chromatin Aging [ChIP-Seq] 74 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.