MiR-342 suppression of an E2F signaling network limits metastatic outgrowth of triple negative breast cancer
Direct links to NCBI, no account and no request form: the whole study as GSE307965_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 15 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1327896 and SRA study SRP619046. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 15 samples.
6 replicated groups read from 15 sample titles; they account for 15 of them. Check it against the sample list below before relying on it.
- GSM9229880 AGO HITS-CLIP of MDA-MB-231HM cells with miR-342-3p rep 1
- GSM9229881 AGO HITS-CLIP of MDA-MB-231HM cells with miR-342-3p rep 2
- GSM9229882 AGO HITS-CLIP of MDA-MB-231HM cells with miR-342-3p rep 3
- GSM9229883 AGO HITS-CLIP of MDA-MB-231HM cells with miR-342-5p rep 1
- GSM9229884 AGO HITS-CLIP of MDA-MB-231HM cells with miR-342-5p rep 2
- GSM9229885 AGO HITS-CLIP of MDA-MB-231HM cells with miR-342-5p rep 3
- GSM9229886 AGO HITS-CLIP of MDA-MB-231HM cells with neg miR rep 1
- GSM9229887 AGO HITS-CLIP of MDA-MB-231HM cells with neg miR rep 2
- GSM9229888 AGO HITS-CLIP of MDA-MB-231HM cells with neg miR rep 3
- GSM9234668 MDA-MB-231HM cells with miR-342-3p rep 1
- GSM9234669 MDA-MB-231HM cells with miR-342-3p rep 2
- GSM9234670 MDA-MB-231HM cells with miR-342-5p rep 1
- GSM9234671 MDA-MB-231HM cells with miR-342-5p rep 2
- GSM9234672 MDA-MB-231HM cells with negative control rep 1
- GSM9234673 MDA-MB-231HM cells with negative control rep 2
- GSE248132 LARP6 promotes carcinogenic features of triple negative breast cancer cell line by directly modulating alternative splicing of associated genes 10 samples
- GSE310353 In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment 116 samples
- GSE305263 Integrated RNA, translation, and proteome profiling reveals midbody remnants as selectively organized signaling vesicles 42 samples
- GSE300304 A platform for multisite immune profiling of premetastatic pancreatic cancer at single cell resolution 30 samples
- GSE263748 Genetic dependencies associated with transcription factor activities in human cancer cell lines 23 samples
- GSE240343 STAG2 mutations and 3D genome organization, chromatin loops, and polycomb signaling in glioblastoma multiforme 20 samples
- GSE282004 Tumor Exosome-transmitted LncRNA CATED Promotes Platinum-resistant in High-grade Serous Ovarian Cancer 17 samples
- GSE246916 MORC2 regulates RBM39-mediated CDK5RAP2 alternative splicing to promote EMT and metastasis in colon cancer 14 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.