Single-cell RNA-sequencing of HNSCC-infiltrating T cells
Direct links to NCBI, no account and no request form: the whole study as GSE287301_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 48 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1212073 and SRA study SRP558177. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 40 samples.
2 replicated groups read from the first 40 of 48 sample titles; they account for 40 of them. Check it against the sample list below before relying on it.
- GSM8743442 Gene expression: chip 1 pool 1
- GSM8743443 Gene expression: chip 1 pool 2
- GSM8743444 Gene expression: chip 1 pool 3
- GSM8743445 Gene expression: chip 1 pool 4
- GSM8743446 Gene expression: chip 1 pool 5
- GSM8743447 Gene expression: chip 1 pool 6
- GSM8743448 Gene expression: chip 1 pool 7
- GSM8743449 Gene expression: chip 1 pool 8
- GSM8743450 Gene expression: chip 2 pool 1
- GSM8743451 Gene expression: chip 2 pool 2
- GSM8743452 Gene expression: chip 2 pool 3
- GSM8743453 Gene expression: chip 2 pool 4
- GSM8743454 Gene expression: chip 2 pool 5
- GSM8743455 Gene expression: chip 2 pool 6
- GSM8743456 Gene expression: chip 2 pool 7
- GSM8743457 Gene expression: chip 2 pool 16
- GSM8743458 CITE-seq: chip 1 pool 1
- GSM8743459 CITE-seq: chip 1 pool 2
- GSM8743460 CITE-seq: chip 1 pool 3
- GSM8743461 CITE-seq: chip 1 pool 4
- GSM8743462 CITE-seq: chip 1 pool 5
- GSM8743463 CITE-seq: chip 1 pool 6
- GSM8743464 CITE-seq: chip 1 pool 7
- GSM8743465 CITE-seq: chip 1 pool 8
- GSM8743466 CITE-seq: chip 2 pool 1
- GSM8743467 CITE-seq: chip 2 pool 2
- GSM8743468 CITE-seq: chip 2 pool 3
- GSM8743469 CITE-seq: chip 2 pool 4
- GSM8743470 CITE-seq: chip 2 pool 5
- GSM8743471 CITE-seq: chip 2 pool 6
- GSM8743472 CITE-seq: chip 2 pool 7
- GSM8743473 CITE-seq: chip 2 pool 16
- GSM8743474 TCR-seq: chip 1 pool 1
- GSM8743475 TCR-seq: chip 1 pool 2
- GSM8743476 TCR-seq: chip 1 pool 3
- GSM8743477 TCR-seq: chip 1 pool 4
- GSM8743478 TCR-seq: chip 1 pool 5
- GSM8743479 TCR-seq: chip 1 pool 6
- GSM8743480 TCR-seq: chip 1 pool 7
- GSM8743481 TCR-seq: chip 1 pool 8
+ 8 more — browse all 48 samples with per-sample file links →
- GSE243013 A single-cell atlas of immune heterogeneity in anti-PD1-treated non-small cell lung cancer 243 samples
- GSE263733 Single-cell transcriptome analysis reveals subtype-specific clonal evolution and microenvironmental changes in liver metastasis of pancreatic adenocarcinoma and their clinical implications 218 samples
- GSE282122 A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease 216 samples
- GSE328048 Single-cell transcriptome reveals keratinocyte subclusters that contribute to altered differentiation and inflammatory responses in atopic dermatitis 116 samples
- GSE327167 Single-cell RNA-seq profiling of pleural mesothelioma and comparator pleural specimens 113 samples
- GSE308103 Single-nucleus RNA-sequencing (snRNA-seq) analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas 75 samples
- GSE266265 Endometrial Insights: Unmasking Endometriosis through Single-Cell Profiling and AI-Based Prediction 60 samples
- GSE202379 Single Nuclei RNA-Seq to map progression of non-alcoholic fatty liver disease (NAFLD) in patients II 59 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.