Divergent medulloblastoma chromatin states disclose KDM2B as a selective dependency.
Direct links to NCBI, no account and no request form: the whole study as GSE270126_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 219 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1125058 and SRA study SRP514105. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 23 samples.
8 replicated groups read from the first 40 of 219 sample titles; they account for 23 of them. Check it against the sample list below before relying on it.
- GSM8330111 D283_Day4_control_rep1
- GSM8330112 D283_Day4_control_rep2
- GSM8330113 D283_Day4_control_rep3
- GSM8330114 D283_Day4_KDM2B_gRNA10_rep1
- GSM8330115 D283_Day4_KDM2B_gRNA10_rep2
- GSM8330116 D283_Day4_KDM2B_gRNA10_rep3
- GSM8330117 D283_Day4_KDM2B_gRNA28_rep1
- GSM8330118 D283_Day4_KDM2B_gRNA28_rep2
- GSM8330119 D283_Day4_KDM2B_gRNA28_rep3
- GSM8330120 D283_Day7_control_rep1
- GSM8330121 D283_Day7_control_rep2
- GSM8330122 D283_Day7_control_rep3
- GSM8330123 D283_Day7_KDM2B_gRNA10_rep1
- GSM8330124 D283_Day7_KDM2B_gRNA10_rep2
- GSM8330125 D283_Day7_KDM2B_gRNA10_rep3
- GSM8330126 D283_Day7_KDM2B_gRNA28_rep1
- GSM8330127 D283_Day7_KDM2B_gRNA28_rep2
- GSM8330128 D283_Day7_KDM2B_gRNA28_rep3
- GSM8330129 DMB006_control_rep1
- GSM8330130 DMB006_control_rep2
- GSM8330131 DMB006_gRNA10_rep1
- GSM8330132 DMB006_gRNA10_rep2
- GSM8330133 DMB006_gRNA10_rep3
- GSM8330134 DMB006_control_rep1_batch2
- GSM8330135 DMB006_control_rep2_batch2
- GSM8330136 DMB006_control_rep3_batch2
- GSM8330137 DMB006_gRNA10_rep1_batch2
- GSM8330138 DMB006_gRNA10_rep2_batch2
- GSM8330139 DMB006_gRNA10_rep3_batch2
- GSM8330140 DMB006_gRNA28_rep1_batch2
- GSM8330141 DMB006_gRNA28_rep2_batch2
- GSM8330142 DMB006_gRNA28_rep3_batch2
- GSM8334856 DMB006_IgG
- GSM8334857 Med2312__IgG
- GSM8334858 Rcmb20__IgG
- GSM8334859 Rcmb28__IgG
- GSM8334860 Med1712__IgG
- GSM8334861 Med113__IgG
- GSM8334862 DMB006_H3K27me3
- GSM8334863 Med2312__H3K27me3
+ 179 more — browse all 219 samples with per-sample file links →
- GSE293644 Divergent proteome tolerance against gain and loss of chromosome arms 21 samples
- GSE240343 STAG2 mutations and 3D genome organization, chromatin loops, and polycomb signaling in glioblastoma multiforme 20 samples
- GSE305896 Selective targeting of HIV infected clones by cognate peptide stimulation and antiproliferative drugs 10 samples
- GSE300844 Deciphering the functional impact of Alzheimer’s Disease-associated variants in resting and proinflammatory immune cells 192 samples
- GSE310353 In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment 116 samples
- GSE307215 Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease 104 samples
- GSE308629 Pooled CRISPR screens identify genes and non-coding genomic regions that regulate red blood cell density 99 samples
- GSE274836 Two unrelated distal genes activated by a shared enhancer benefit from localizing inside the same small topological domain 97 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.