Multi-omics analysis of FOXO3 pioneer factor activity reveals distinct networks in proliferating and DNA damage induced senescent cells
Direct links to NCBI, no account and no request form: the whole study as GSE237810_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 65 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA996654 and SRA study SRP450413. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 39 samples.
13 replicated groups read from the first 40 of 65 sample titles; they account for 39 of them. Check it against the sample list below before relying on it.
- GSM7653843 U87MG cells, FOXO3 Act.8hrs, Rep1
- GSM7653844 U87MG cells, FOXO3 Act.8hrs, Rep2
- GSM7653845 U87MG cells, FOXO3 Act.8hrs, Rep3
- GSM7653846 U87MG cells, FOXO3 Act.16hrs, Rep1
- GSM7653847 U87MG cells, FOXO3 Act.16hrs, Rep2
- GSM7653848 U87MG cells, FOXO3 Act.16hrs, Rep3
- GSM7653849 U87MG cells, GFP control, Rep1
- GSM7653850 U87MG cells, GFP control, Rep2
- GSM7653851 U87MG cells, GFP control, Rep3
- GSM7653852 U87MG cells, GFP control w PFI3, Rep1
- GSM7653853 U87MG cells, GFP control w PFI3, Rep2
- GSM7653854 U87MG cells, GFP control w PFI3, Rep3
- GSM7653855 U87MG, FOXO3 Act.8hrs w PFI3, Rep1
- GSM7653856 U87MG, FOXO3 Act.8hrs w PFI3, Rep2
- GSM7653857 U87MG, FOXO3 Act.8hrs w PFI3, Rep3
- GSM7653858 U87MG, FOXO3 Act.16hrs w PFI3, Rep1
- GSM7653859 U87MG, FOXO3 Act.16hrs w PFI3, Rep2
- GSM7653860 U87MG, FOXO3 Act.16hrs w PFI3, Rep3
- GSM7653861 U87MG cells, 3d Etoposide, Rep1
- GSM7653862 U87MG cells, 3d Etoposide, Rep2
- GSM7653863 U87MG cells, 3d Etoposide, Rep3
- GSM7653864 U87MG cells, 14d Etoposide, Rep1
- GSM7653865 U87MG cells, 14d Etoposide, Rep2
- GSM7653866 U87MG cells, 14d Etoposide, Rep3
- GSM7653867 U87MG cells, shFOXO3, Rep1
- GSM7653868 U87MG cells, shFOXO3, Rep2
- GSM7653869 U87MG cells, shFOXO3, Rep3
- GSM7653870 U87MG cells, shControl, Rep1
- GSM7653871 U87MG cells, shControl, Rep2
- GSM7653872 U87MG cells, shControl, Rep3
- GSM7653873 U87MG cells, shFOXO3, 3d etoposide, Rep1
- GSM7653874 U87MG cells, shFOXO3, 3d etoposide, Rep2
- GSM7653875 U87MG cells, shFOXO3, 3d etoposide, Rep3
- GSM7653876 U87MG cells, shFOXO3, 14d etoposide, Rep1
- GSM7653877 U87MG cells, shFOXO3, 14d etoposide, Rep2
- GSM7653878 U87MG cells, shFOXO3, 14d etoposide, Rep3
- GSM7653879 U87MG cells, shControl, 3d etoposide, Rep1
- GSM7653880 U87MG cells, shControl, 3d etoposide, Rep2
- GSM7653881 U87MG cells, shControl, 3d etoposide, Rep3
- GSM7653882 U87MG cells, shControl, 14d etoposide, Rep1
+ 25 more — browse all 65 samples with per-sample file links →
- GSE330130 A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS [snRNA-Seq; snATAC-Seq] 87 samples
- GSE295823 Integrative multi-omics identifies AP-1 transcription factor as a targetable mediator of acquired osimertinib resistance in non-small cell lung cancer 20 samples
- GSE335210 SOX9-BAF multi-omics profiling in human colon cancer cell models 173 samples
- GSE294559 Single-cell multi-omics characterize colorectal tumors, adjacent healthy tissue and matched organoids identifying CRC-unique features 72 samples
- GSE237959 ZBTB48 is a pioneer factor regulating B-cell-specific CIITA expression. 36 samples
- GSE254297 Integrated multi-omics analysis 10 samples
- GSE303478 Systematic investigation reveals extensive Epstein-Barr virus transcriptional regulation of the human genome 217 samples
- GSE296250 Targeting p300/CBP abolishes HOXB13 loss-induced lipogenesis and tumor metastasis 43 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.