Comparison of NK cell transcriptomes between C57BL6 and NOD mouse strains

Direct links to NCBI, no account and no request form: the whole study as GSE342137_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1505654 and SRA study SRP723220. Searching any of these in the dataset finder brings you back here.

Supports a between-group comparison across 8 samples.

2 replicated groups read from 8 sample titles; they account for 8 of them. Check it against the sample list below before relying on it.

• GSM9923728 C57BL6-Spleen-NK-2
• GSM9923729 C57BL6-Spleen-NK-3
• GSM9923730 C57BL6-Spleen-NK-4
• GSM9923731 C57BL6-Spleen-NK-6
• GSM9923732 NOD-Spleen-NK-2
• GSM9923733 NOD-Spleen-NK-3
• GSM9923734 NOD-Spleen-NK-4
• GSM9923735 NOD-Spleen-NK-5

• GSE267904 Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis 24 samples
• GSE324432 A novel sorting method uncovers metabolic heterogeneity between mononucleated and binucleated tetraploid hepatocytes 15 samples
• GSE314817 Multi-tissue, multi-time-point transcriptomic atlas of aging in mice and rats [mouse] 2432 samples
• GSE293709 Transcriptome analysis in the prefrontal cortex of different ASD mouse models treated with drug 1565 samples
• GSE294832 Modular neuroinflammatory network discovery from large-scale phenotypic screening in genetically heterogeneous mice [part10] 1000 samples
• GSE326100 scRNA-seq of mouse cochlea organoid cells 768 samples
• GSE331176 Phagosome-mediated activation of STING by purine and pyrimidine-based bacterial cyclic dinucleotides 380 samples
• GSE304862 Semaglutide and exercise synergy in obesity: preserving muscle mass and uncovering organ crosstalk 209 samples

Search all mouse RNA-seq datasets in GEO →