ATAC-seq of the granulopoiesis lineage from different organs
Direct links to NCBI, no account and no request form: the whole study as GSE318435_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 34 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1418729 and SRA study SRP674636. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 34 samples.
10 replicated groups read from 34 sample titles; they account for 34 of them. Check it against the sample list below before relying on it.
- GSM9494541 GMP,BM,rep1
- GSM9494542 GMP,BM,rep3
- GSM9494543 GMP,SP,rep3
- GSM9494544 GMP,SP,rep4
- GSM9494545 PreN,BM,rep1
- GSM9494546 PreN,BM,rep2
- GSM9494547 PreN,BM,rep3
- GSM9494548 PreN,BM,rep4
- GSM9494549 PreN,SP,rep1
- GSM9494550 PreN,SP,rep2
- GSM9494551 PreN,SP,rep3
- GSM9494552 PreN,SP,rep4
- GSM9494553 imNeu,BM,rep1
- GSM9494554 imNeu,BM,rep2
- GSM9494555 imNeu,BM,rep3
- GSM9494556 imNeu,BM,rep4
- GSM9494557 imNeu,SP,rep1
- GSM9494558 imNeu,SP,rep2
- GSM9494559 imNeu,SP,rep3
- GSM9494560 imNeu,SP,rep4
- GSM9494561 imNeu,Bld,rep1
- GSM9494562 imNeu,Bld,rep2
- GSM9494563 imNeu,Bld,rep3
- GSM9494564 Neutro,BM,rep1
- GSM9494565 Neutro,BM,rep2
- GSM9494566 Neutro,BM,rep3
- GSM9494567 Neutro,BM,rep4
- GSM9494568 Neutro,SP,rep1
- GSM9494569 Neutro,SP,rep2
- GSM9494570 Neutro,SP,rep3
- GSM9494571 Neutro,SP,rep4
- GSM9494572 Neutro,Bld,rep1
- GSM9494573 Neutro,Bld,rep2
- GSM9494574 Neutro,Bld,rep3
- GSE298001 Stage-specific Epigenetic Priming Amplifies Gene Activation During Lineage Commitment [ATAC-Seq] 36 samples
- GSE337898 ATAC-seq profiling of lineage-traced exhausted and memory-like CD8+ T cell subsets during tumor progression 24 samples
- GSE279088 Molecular dynamics driving phenotypic divergence among KRAS mutants in pancreatic tumorigenesis [ATAC-Seq] 74 samples
- GSE264614 Emerging cooperativity between Oct4 and Sox2 governs the pluripotency network in mouse early embryos [ATAC-seq] 44 samples
- GSE302858 Multi-tier signaling and epigenomic reprogramming drive microglial inflammatory states and functions associated with demyelination [ATAC-seq] 42 samples
- GSE304037 Decoupling oxidative resilience from reprogramming to rejuvenate the RPE and restore vision [GSTA4_ATAC-seq_1] 42 samples
- GSE294103 SIRT6 Overexpression Counteracts Chromatin Aging [ATAC-Seq_tg] 28 samples
- GSE302996 Nodal/Smad2 signaling sustains developmental pausing by repressing Pparg -mediated lipid metabolism [ATAC-seq] 24 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.