CK2-mediated DEK Phosphorylation Drives PBX3 Overexpression: A Core Event in Hematopoietic Stem Cell-to-Leukemia Stem Cell Transformation
Direct links to NCBI, no account and no request form: the whole study as GSE309285_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 53 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1335085 and SRA study SRP627107. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 37 samples.
15 replicated groups read from the first 40 of 53 sample titles; they account for 37 of them. Check it against the sample list below before relying on it.
- GSM9262664 L-GMP_FL_1
- GSM9262665 L-GMP_FL_2
- GSM9262666 L-GMP_FL_3
- GSM9262667 L-GMP_FL_4
- GSM9262668 L-GMP_KO_1
- GSM9262669 L-GMP_KO_2
- GSM9262670 L-GMP_KO_3
- GSM9262671 L-GMP_KO_4
- GSM9262672 ATAC_L-GMP_FL_1
- GSM9262673 ATAC_L-GMP_FL_2
- GSM9262674 ATAC_L-GMP_KO_1
- GSM9262675 ATAC_L-GMP_KO_2
- GSM9264368 CUT-Tag_L-GMP_WT_DEK_1
- GSM9264369 CUT-Tag_L-GMP_WT_DEK_2
- GSM9264370 CUT-Tag_L-GMP_4S-A_DEK_1
- GSM9264371 CUT-Tag_L-GMP_4S-A _DEK_2
- GSM9264372 CUT-Tag_L-GMP_WT_PBX3_1
- GSM9264373 CUT-Tag_L-GMP_WT_PBX3_2
- GSM9264374 CUT-Tag_L-GMP_WT_GABPA_1
- GSM9264375 CUT-Tag_L-GMP_WT_GABPA_2
- GSM9264376 CUT-Tag_L-GMP_KO_GABPA_1
- GSM9264377 CUT-Tag_L-GMP_KO_GABPA_2
- GSM9264378 CUT-Tag_L-GMP_4S-A_GABPA_1
- GSM9264379 CUT-Tag_L-GMP_4S-A_GABPA_2
- GSM9700762 ATAC_L-GMP_FL_3
- GSM9700763 ATAC_L-GMP_KO_3
- GSM9700764 ATAC_L-GMP_4S-A_1
- GSM9700765 ATAC_L-GMP_4S-A_2
- GSM9700766 ATAC_MOLM13_shControl_1
- GSM9700767 ATAC_MOLM13_shControl_2
- GSM9700768 ATAC_MOLM13_shDEK_1
- GSM9700769 ATAC_MOLM13_shDEK_2
- GSM9700770 ATAC_MOLM13_4S-A_1
- GSM9700771 ATAC_MOLM13_4S-A_2
- GSM9700772 CUT-Tag_L-GMP_FL_PBX3_1
- GSM9700773 CUT-Tag_L-GMP_FL_PBX3_2
- GSM9700774 CUT-Tag_L-GMP_KO_PBX3_1
- GSM9700775 CUT-Tag_L-GMP_KO_PBX3_2
- GSM9700776 CUT-Tag_L-GMP_WT_DEK_3
- GSM9700777 CUT-Tag_L-GMP_KO_DEK_1
+ 13 more — browse all 53 samples with per-sample file links →
- GSE303605 Rbm5 Sustains Leukemia Stem Cells Through a Myc-driven Transcriptional Circuitry 15 samples
- GSE289420 Astrocyte-derived cholesterol drives synaptic gene expression in developing neurons and reciprocal astrocytic transcriptional programs 416 samples
- GSE320162 Minimizing far-extending chromatin perturbation in genome editing preserves stem cell identity [RNA-Seq] 347 samples
- GSE312574 Unbalanced chromatin binding of Polycomb complexes drives neurodevelopmental disorders 179 samples
- GSE253753 Functional Characterization of Cooperating MGA Mutations in RUNX1::RUNX1T1 Acute Myeloid Leukemia 126 samples
- GSE232555 FOXA2/AP-1 drives prostate cancer lineage plasticity 101 samples
- GSE295715 Leukemia-mutated proteins PHF6 and PHIP form a chromatin complex that represses acute myeloid leukemia stemness 90 samples
- GSE292300 A core transcriptional regulatory circuitry controls super-enhancer-driven activation of LGR5 in colorectal cancer: ChIP-seq 76 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.