Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq
Direct links to NCBI, no account and no request form: the whole study as GSE256232_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 67 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1078732 and SRA study SRP490697. Searching any of these in the dataset finder brings you back here.
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+ 67 more — browse all 67 samples with per-sample file links →
- GSE225993 Disruption of RNAPII transcription elongation links Oncogenic splicing factor mutations to replciation stress and targetable alterations in chromatin landscape [ATAC-seq] 16 samples
- GSE320163 Minimizing far-extending chromatin perturbation in genome editing preserves stem cell identity [ATAC-Seq] 377 samples
- GSE286875 Improved spike-in normalization clarifies the relationship between active histone modifications and transcription 244 samples
- GSE240599 An eRNA Transcription Checkpoint For Diverse Signal-dependent Enhancer Activation Programs 130 samples
- GSE248942 Spatiotemporal control of SMARCA5 by a MAPK-RUNX1 axis distinguishes mutant KRAS-driven pancreatic malignancy from tissue regeneration (ATAC-Seq) 123 samples
- GSE292300 A core transcriptional regulatory circuitry controls super-enhancer-driven activation of LGR5 in colorectal cancer: ChIP-seq 76 samples
- GSE269958 Chromatin-associated LTR RNA m5C oxidation by TET2 regulates chromatin state and leukemogenesis [seq_DNA-ATAC_set2] 54 samples
- GSE172299 A myeloid maturation program initiated by nucleotide depletion during S phase [ATAC-Seq] 48 samples
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