The receptor protein tyrosine phosphatase PTPRK promotes intestinal repair and catalysis-independent tumor suppression
Direct links to NCBI, no account and no request form: the whole study as GSE254156_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 25 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1068645 and SRA study SRP485724. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 25 samples.
5 replicated groups read from 25 sample titles; they account for 25 of them. Check it against the sample list below before relying on it.
- GSM8035149 CS_rep1
- GSM8035150 CS_rep2
- GSM8035151 CS_rep3
- GSM8035152 CS_rep4
- GSM8035153 CS_rep5
- GSM8035154 KO_rep1
- GSM8035155 KO_rep2
- GSM8035156 KO_rep3
- GSM8035157 KO_rep4
- GSM8035158 KO_rep5
- GSM8035159 Rescue_rep1
- GSM8035160 Rescue_rep2
- GSM8035161 Rescue_rep3
- GSM8035162 Rescue_rep4
- GSM8035163 Rescue_rep5
- GSM8035164 Rescue_rep6
- GSM8035165 RQ_rep1
- GSM8035166 RQ_rep2
- GSM8035167 RQ_rep3
- GSM8035168 RQ_rep4
- GSM8035169 WT_rep1
- GSM8035170 WT_rep2
- GSM8035171 WT_rep3
- GSM8035172 WT_rep4
- GSM8035173 WT_rep5
- GSE264145 Inhibition of DUSP18 impairs cholesterol biosynthesis and promotes anti-tumor immunity in colorectal cancer 12 samples
- GSE317764 High-Fat Diet Causes Rapid Loss of Intestinal Group 3 Innate Lymphoid Cells Through Microbiota-Driven Inflammation 270 samples
- GSE281472 Targeting CD206+ macrophages disrupts the establishment of a key anti-tumor immune axis 245 samples
- GSE341321 Vitamin B2 Sensing by the Nuclear Receptor AhR Reprograms Hepatic Metabolism [RNA-Seq] 100 samples
- GSE324329 A kidney-protective mechanism via cellular oxidative stress reduction induced by CD5L protein 38 samples
- GSE242839 PD-1 is induced on tumor-associated macrophages in obesity to directly restrain anti-tumor immunity 29 samples
- GSE310025 Intrinsic RB activation induces tumoral and stromal anti-tumor responses that limit triple-negative breast cancer [RNA-Seq] 28 samples
- GSE245949 Failed reprogramming of transformed cells due to induction of apoptosis and senescence impairs tumor progression in lung cancer 24 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.