DDX41 heterozygosity impairs hematopoietic progenitor cell fitness and cooperates with p53 mutation to drive malignancy
Direct links to NCBI, no account and no request form: the whole study as GSE247409_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 26 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1037498 and SRA study SRP471122. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 17 samples.
6 replicated groups read from 26 sample titles; they account for 17 of them. Check it against the sample list below before relying on it.
- GSM7889060 Ddx41-WT;p53-WT, WTWT10
- GSM7889061 Ddx41-WT;p53-WT, WTWT12
- GSM7889062 Ddx41-WT;p53-WT, WTWT11
- GSM7889063 Ddx41-HET;p53-WT, HETWT34
- GSM7889064 Ddx41-HET;p53-WT, HETWT32
- GSM7889065 Ddx41-WT;p53-HET, WTHET24
- GSM7889066 Ddx41-WT;p53-HET, WTHET23
- GSM7889067 Ddx41-WT;p53-HET, WTHET22
- GSM7889068 Ddx41-HET;p53-HET, HETHET46
- GSM7889069 Ddx41-HET;p53-HET, HETHET47
- GSM7889070 Ddx41-HET-8
- GSM7889071 Ddx41-HET-7
- GSM7889072 Ddx41-HET-6
- GSM7889073 Ddx41-WT-4
- GSM7889074 Ddx41-WT-3
- GSM7889075 Ddx41-WT-2
- GSM7889076 Ddx41-WT-1
- GSM7889134 Sh-Control_38A
- GSM7889135 sh-Control_38B
- GSM7889136 sh-Control_38D
- GSM7889137 Sh-DDX41_1_409A
- GSM7889138 Sh-DDX41_1_409B
- GSM7889139 Sh-DDX41_1_409D
- GSM7889140 Sh-DDX41_2_411A
- GSM7889141 Sh-DDX41_2_411B
- GSM7889142 Sh-DDX41_2_411D
- GSE248947 Spatiotemporal control of SMARCA5 by a MAPK-RUNX1 axis distinguishes mutant KRAS-driven pancreatic malignancy from tissue regeneration (RNA-Seq) 28 samples
- GSE260997 Mutant IDH inhibitors induce lineage differentiation in IDH-mutant Oligodendroglioma III 2458 samples
- GSE202126 Single-cell Total-RNA Profiling Unveils Regulatory Hubs of Transcription Factors 1089 samples
- GSE307112 Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [I] 886 samples
- GSE327497 Localized PD-1 CAR T therapy reprograms neuroinflammation. 390 samples
- GSE289991 Persistent dopamine-dependent remodeling of the neural transcriptome in response to pregnancy and postpartum [bulk RNA-seq] 294 samples
- GSE277025 Inhaled Xenon modulates microglia and ameliorates disease in mouse models of amyloidosis and tauopathy 192 samples
- GSE260456 DOT1L provides transcriptional memory through PRC1.1 antagonism [RNA-seq] 180 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.