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Establishment and characterization of patient-derived in-vitro and in-vivo models of penile squamous cell carcinoma

GSE336821 Mus musculus; Homo sapiens Expression profiling by high throughput sequencing 10 samples Submitted 2026/07/02 Platform GPL24676Platform GPL24247
Summary
Tissue samples from patients with penile squamous cell carcinoma were used to generate primar cell cultures and these cell cultures were injectied under the renal capsule of immunodeficient NSG mice for xenograft development. Four primary cell lines were successfully established (PeCa53, PeCa60, PeCa65, PeCa70). For all four cell lines, the patient tissue sample and primary cell lines were submitted to RNAseq. Stably growing xenografts from PeCa53 and PeCa60 were harvested as well for analysis by RNAseq.
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Direct links to NCBI, no account and no request form: the whole study as GSE336821_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 10 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1483412 and SRA study SRP713387. Searching any of these in the dataset finder brings you back here.

Study design
10 conditions, each sampled once — no replicated groups

Read from 10 sample titles: 10 distinct titles with little repetition. Check it against the sample list below before relying on it.

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