Intersection of transient cell states with stable cell types in hippocampus

Direct links to NCBI, no account and no request form: the whole study as GSE335423_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1478526 and SRA study SRP709670. Searching any of these in the dataset finder brings you back here.

The grouping that defines any comparison lives in the sample characteristics, which GEO records separately from the titles.

Sample titles run Sublibrary 1 … Sublibrary 8 and carry no group information.

• GSM9813464 Sublibrary 1
• GSM9813465 Sublibrary 2
• GSM9813466 Sublibrary 3
• GSM9813467 Sublibrary 4
• GSM9813468 Sublibrary 5
• GSM9813469 Sublibrary 6
• GSM9813470 Sublibrary 7
• GSM9813471 Sublibrary 8

• GSE185862 A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation 95 samples
• GSE302792 SenCat: Cataloging human cell senescence through multiomic profiling of multiple senescent primary cell types 33 samples
• GSE314817 Multi-tissue, multi-time-point transcriptomic atlas of aging in mice and rats [mouse] 2432 samples
• GSE293709 Transcriptome analysis in the prefrontal cortex of different ASD mouse models treated with drug 1565 samples
• GSE294832 Modular neuroinflammatory network discovery from large-scale phenotypic screening in genetically heterogeneous mice [part10] 1000 samples
• GSE326100 scRNA-seq of mouse cochlea organoid cells 768 samples
• GSE331176 Phagosome-mediated activation of STING by purine and pyrimidine-based bacterial cyclic dinucleotides 380 samples
• GSE304862 Semaglutide and exercise synergy in obesity: preserving muscle mass and uncovering organ crosstalk 209 samples

Search all mouse RNA-seq datasets in GEO →