CBFA2T3-GLIS2 fusion-mediated mSWI/SNF chromatin remodeler disruption generates cancer-specific dependencies in AMKL
Direct links to NCBI, no account and no request form: the whole study as GSE328578_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 156 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1455670 and SRA study SRP692800. Searching any of these in the dataset finder brings you back here.
Read from the first 40 of 156 sample titles: 32 distinct titles with little repetition. Check it against the sample list below before relying on it.
- GSM9682468 JFS2409_M07e_H3K27me3_rep1
- GSM9682469 JFS2410_M07e_CBFA2T3-ab1_rep1
- GSM9682470 JFS2412_M07e_GLIS2_rep1
- GSM9682471 JFS2415_M07e_H3K27me3_rep2
- GSM9682472 JFS2416_M07e_CBFA2T3-ab1_rep2
- GSM9682473 JFS2418_M07e_GLIS2_rep2
- GSM9682474 JFS2420_M07e_IgG_rep1
- GSM9682475 JFS2421_M07e_IgG_rep2
- GSM9682476 JFS2423_WSUAML_H3K27me3_rep1
- GSM9682477 JFS2424_WSUAML_CBFA2T3-ab1_rep1
- GSM9682478 JFS2426_WSUAML_GLIS2_rep1
- GSM9682479 JFS2429_WSUAML_H3K27me3_rep2
- GSM9682480 JFS2430_WSUAML_CBFA2T3-ab1_rep2
- GSM9682481 JFS2432_WSUAML_GLIS2_rep2
- GSM9682482 JFS2434_WSUAML_IgG_rep1
- GSM9682483 JFS2435_WSUAML_IgG_rep2
- GSM9682484 JFS2757_K562_SMARCA4_rep1
- GSM9682485 JFS2857_K562_SMARCC1_rep1
- GSM9682486 JFS2858_K562_SMARCA4_rep2
- GSM9682487 GBe8s1_cordBlood-GFP_BRG1-1
- GSM9682488 GBe8s3_cordBlood-GFP_K27ac-1
- GSM9682489 GBe8s5_cordBlood-GFP_K4me3-1
- GSM9682490 GBe8s6_cordBlood-CG_BRG1-1
- GSM9682491 GBe8s7_cordBlood-CG_BRG1-2
- GSM9682492 GBe8s8_cordBlood-CG_k27ac-1
- GSM9682493 GBe8s9_cordBlood-CG_k27ac-2
- GSM9682494 GBe7s11_cordBlood-CG_IgG-1
- GSM9682495 GBe8s12_cordBlood-CG_k4me3-1
- GSM9682496 GBe8s13_cordBlood-CG_k4me3-2
- GSM9682497 GBe046s005_4
- GSM9682498 GBe046s006_5
- GSM9682499 GBe046s008_6
- GSM9682500 GBe046s005_13
- GSM9682501 GBe046s005_14
- GSM9682502 GBe046s006_15
- GSM9682503 GBe046s006_16
- GSM9682504 GBe046s008_17
- GSM9682505 GBe046s008_18
- GSM9682506 GBe046s005_24
- GSM9682507 GBe046s005_25
+ 116 more — browse all 156 samples with per-sample file links →
- GSE275631 Characterization of E2F8-mediated transcriptional regulation in lethal prostate cancer 39 samples
- GSE309697 Generation of a Comprehensive Epigenomic Atlas in Clear Cell Renal Cell Carcinoma Informs Kidney Cancer Progression and Heritability 265 samples
- GSE335210 SOX9-BAF multi-omics profiling in human colon cancer cell models 173 samples
- GSE245969 EP300/CREBBP acetyltransferase inhibition limits steroid receptor and FOXA1 signaling in prostate cancer cells 122 samples
- GSE296192 Hypoxic regulation of chromatin and gene transcription 98 samples
- GSE253121 NELF prevents transcriptional readthrough into DNA replication zones in cancer cells 70 samples
- GSE303855 Mechanistic and Epigenetic Partitioning of Lamina-Associated Chromatin Revealed by a Genome-Wide Imaging Screen 45 samples
- GSE281743 Epigenetic Subtypes of High-Grade T1 Bladder Cancer Reveal Intra-Tumor Heterogeneity and Distinct Interactions with Tumor Microenvironment 41 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.