Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation
Direct links to NCBI, no account and no request form: the whole study as GSE326753_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 68 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1446850 and SRA study SRP687979. Searching any of these in the dataset finder brings you back here.
Supports a case/control comparison: 1 samples read as cases, 15 as controls.
16 replicated groups read from the first 40 of 68 sample titles; they account for 38 of them. Check it against the sample list below before relying on it.
- GSM9632709 A431_DMSO_1
- GSM9632710 A431_DMSO_2
- GSM9632711 A431_NEDD8i_1
- GSM9632712 A431_NEDD8i_2
- GSM9632713 CAL27_DMSO_1
- GSM9632714 CAL27_DMSO_2
- GSM9632715 CAL27_NEDD8i_1
- GSM9632716 CAL27_NEDD8i_2
- GSM9632717 K14pos_IMQ_1
- GSM9632718 K14neg_IMQ_1
- GSM9632719 K14pos_IMQ_2
- GSM9632720 K14neg_DMSO_1
- GSM9632721 K14neg_DMSO_2
- GSM9632722 K14neg_DMSO_3
- GSM9632723 K14pos_DMSO_1
- GSM9632724 K14pos_DMSO_2
- GSM9632725 K14pos_DMSO_3
- GSM9632726 K14neg_IMQ_2
- GSM9632727 B6_IMQ_1
- GSM9632728 B6_IMQ_2
- GSM9632729 B6_DMSO_1
- GSM9632730 B6_DMSO_2
- GSM9632731 S2_K14neg_1
- GSM9632732 S2_K14neg_2
- GSM9632733 S2_K14neg_3
- GSM9632734 S2_K14pos_1
- GSM9632735 S2_K14pos_2
- GSM9632736 S2_K14pos_3
- GSM9632737 N8_K14neg_1
- GSM9632738 N8_K14neg_2
- GSM9632739 N8_K14neg_3
- GSM9632740 N8_K14pos_1
- GSM9632741 N8_K14pos_2
- GSM9632742 N8_K14pos_3
- GSM9632743 DMSO_1
- GSM9632744 DMSO_2
- GSM9632745 NEDD8i_1
- GSM9632746 NEDD8i_2
- GSM9636011 Non-recombination control skin 1
- GSM9636012 Sumo knockout 2
+ 28 more — browse all 68 samples with per-sample file links →
- GSE248942 Spatiotemporal control of SMARCA5 by a MAPK-RUNX1 axis distinguishes mutant KRAS-driven pancreatic malignancy from tissue regeneration (ATAC-Seq) 123 samples
- GSE317764 High-Fat Diet Causes Rapid Loss of Intestinal Group 3 Innate Lymphoid Cells Through Microbiota-Driven Inflammation 270 samples
- GSE306977 Cell composition and gene-expression dynamics of skeletal muscle regeneration after contraction-induced injury 70 samples
- GSE263125 Macrophage-induced enteric neurodegeneration leads to motility impairment during gut inflammation 23 samples
- GSE284742 Injured epithelial cell states impact kidney allograft survival after T-cell-mediated rejection 21 samples
- GSE270229 Inhibition of miR-10b treats metastatic breast cancer by targeting stem cell-like properties 18 samples
- GSE314446 Human GPR15 deficiency reveals CD8+ T regulatory cell-macrophage crosstalk in intestinal inflammation 16 samples
- GSE278959 Genome-wide DNA replication profiling and full-length total RNA sequencing from the same single cell 546 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.