RoCK and ROI: a single-cell RNA-sequencing method with enhanced transcriptome information via targeted enrichment of transcripts and preselected, region-specific sequencing
Direct links to NCBI, no account and no request form: the whole study as GSE266161_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 13 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA1106029 and SRA study SRP504310. Searching any of these in the dataset finder brings you back here.
Read from 13 sample titles: 13 distinct titles with little repetition. Check it against the sample list below before relying on it.
- GSM8238055 unmod, first mixing experiment
- GSM8238056 unmod_T, first mixing experiment
- GSM8240933 unmod, second mixing experiment
- GSM8240934 unmod_roi, second mixing experiment
- GSM8240935 rock, second mixing experiment
- GSM8240936 rockroi, second mixing experiment
- GSM8241647 Colon, rockroi multimodal
- GSM8241648 Colon, unmod unimodal
- GSM8241649 Colon, rockroi unimodal
- GSM8752429 leukemia cell lines, rockroi
- GSM8752430 leukemia patient sample, rockroi
- GSM9186646 hela cell lines, unmodified
- GSM9186647 hela cell lines, rockroi
- GSE202126 Single-cell Total-RNA Profiling Unveils Regulatory Hubs of Transcription Factors 1089 samples
- GSE289991 Persistent dopamine-dependent remodeling of the neural transcriptome in response to pregnancy and postpartum [bulk RNA-seq] 294 samples
- GSE272618 Single-Molecule Barcoding Technology for Single-Cell Genomics 140 samples
- GSE331030 Lentiviral single-cell MPRA of synthetic enhancers reveals motif affinity-based encoding of cell state specificity [sc-lentiMPRA 2] 66 samples
- GSE335842 Single-Cell RNA sequencing reveals clonally-expanded CD4+ tissue-resident memory T cells in Histidyl-tRNA Synthetase-induced myositis 38 samples
- GSE269664 Heterobifunctional proteomimetic polymers for targeted degradation of MYC and KRAS 33 samples
- GSE307132 Effect of Dox-induced Cas13 expression in stable cell lines on the mouse transcriptome and co-cultured human PSCs 21 samples
- GSE271857 AKAP95 condensates regulate transcription and can be targeted in MLL-fusion driven oncogenesis (RNA-Seq) 18 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.