Implicating type 2 diabetes effector genes in relevant metabolic cellular models using promoter-focused Capture-C [Capture-C]

Direct links to NCBI, no account and no request form: the whole study as GSE262496_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 11 samples.

Also filed as BioProject PRJNA1092046. Searching any of these in the dataset finder brings you back here.

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 11 more — browse all 11 samples with per-sample file links →

• GSE273594 Single-cell multiome profiling reveals pancreas cell type-specific gene regulatory programs of type 1 diabetes progression [multiome] 8 samples
• GSE244446 Altered enhancer-promoter interaction leads to MNX1 expression in pediatric acute myeloid leukemia with t(7;12)(q36;p13) [ACT-Seq] 32 samples
• GSE271370 Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19 23 samples
• GSE300809 Enhancer Dynamics and Spatial Organization Drive Anatomically Restricted Cellular States in the Human Spinal Cord [STABseq] 16 samples
• GSE279521 Focal deletions of a promoter tether activate the IRX3 oncogene in T-cell acute lymphoblastic leukemia [UMI4C] 13 samples
• GSE244275 Altered enhancer-promoter interaction leads to MNX1 expression in pediatric acute myeloid leukemia with t(7;12)(q36;p13) [4C-Seq] 10 samples
• GSE281238 Generalization of the sci-L3 method to achieve high-throughput linear amplification for replication template strand sequencing, genome conformation capture, and the joint profiling of RNA and chromatin accessibility 7 samples
• GSE272080 3D chromatin-based variant-to-gene maps across 57 human cell types reveal the cellular and genetic architecture of autoimmune disease susceptibility [captureC] 6 samples

Search all human datasets in GEO →